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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5705168_5706398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5705168 - 5706398

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TTTTCCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGAACGTTCACC

Flanking Amino Acid:

PGVPMEIVLNKESRRKTPVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

64.5

41.5

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

79.9

0.67

0.8

73.8

36.8

Minor 5ss

38.4

-1.3

3.4

50.1

40.9

Minor BPS

46.2

-0.3

2.4

60.83

43.9

Associated Gene:

Gene:

HYOU1

Ensembl Gene ID:

ENSAPLG00000006043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006310

5693275 - 5706722

13448