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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5707280_5708302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5707280 - 5708302

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCATCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGGCCCCTGACC

Flanking Amino Acid:

YYDHLRSAAKSPNPALTFCV

Intron Amino Acid Position:

1284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.6

0.49

0.8

64.7

30.8

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

49.2

-0

1.7

41.6

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005911

5707139 - 5727739

20601

ENSAPLT00000005910

5707139 - 5727739

20601

ENSAPLT00000020586

5707139 - 5727739

20601