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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5708389_5708538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5708389 - 5708538

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGCACCACAGCT

Flanking Amino Acid:

RMKRTLSYYVDKHETKLKGV

Intron Amino Acid Position:

1255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

63.9

0.31

60.7

35.2

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

44.3

-0.3

63.31

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005911

5707139 - 5727739

20601

ENSAPLT00000005910

5707139 - 5727739

20601

ENSAPLT00000020586

5707139 - 5727739

20601