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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5708759_5708917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5708759 - 5708917

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGGGGC

5'SS Class:

major

3'SS Sequence:

GTTGCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

GTTTGCAAAGCA

Flanking Amino Acid:

VKLREKHFSQARPLTRYLPI

Intron Amino Acid Position:

1182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

39.2

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

74.5

0.55

0.9

65.7

40.9

Minor 5ss

30.2

-2.3

3.5

40.6

Minor BPS

42.4

-0.5

2.4

61.04

44.7

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005911

5707139 - 5727739

20601

ENSAPLT00000005910

5707139 - 5727739

20601

ENSAPLT00000020586

5707139 - 5727739

20601