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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5710119_5711159_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5710119 - 5711159

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGACACA

5'SS Class:

major

3'SS Sequence:

TCCCGGGGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGCCCGCTGACC

Flanking Amino Acid:

AEPLQPGDAPGQQVIEEQKR

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

64.9

41.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

59.8

0.22

1.1

52.4

41.6

Minor 5ss

37.6

-1.4

3.2

49.3

46.7

Minor BPS

-0.4

2.3

57.03

41.5

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020586

5707139 - 5727739

20601

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005910

5707139 - 5727739

20601