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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5710119_5711493_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5710119 - 5711493

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTCC

5'SS Class:

major

3'SS Sequence:

TCCCGGGGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGCCCGCTGACC

Flanking Amino Acid:

TKRQLALQQKGQQVIEEQKR

Intron Amino Acid Position:

1033

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.7

40.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

59.8

0.22

1.1

52.4

41.6

Minor 5ss

44.7

-0.6

2.8

52.1

44.7

Minor BPS

-0.4

2.3

57.03

41.5

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005911

5707139 - 5727739

20601