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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5711205_5711493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5711205 - 5711493

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTCC

5'SS Class:

major

3'SS Sequence:

GGCGTGCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

TTTCCCTCAACC

Flanking Amino Acid:

TKRQLALQQKADPLSAEPLQ

Intron Amino Acid Position:

990

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.7

40.1

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

62.5

0.28

50.5

43.9

Minor 5ss

44.7

-0.6

2.8

52.1

44.7

Minor BPS

75.8

0.79

1.5

84.91

33.3

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020586

5707139 - 5727739

20601

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005910

5707139 - 5727739

20601