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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5714784_5714943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5714784 - 5714943

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTGG

5'SS Class:

major

3'SS Sequence:

CCCTGTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GTGGTGGTAACC

Flanking Amino Acid:

RNSVLQLLQKEKEKLVSLER

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.3

45.8

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

65.9

0.36

0.9

56.5

38.8

Minor 5ss

41.7

-0.9

3.2

55.9

48.3

Minor BPS

41.2

-0.6

2.5

53.7

44.5

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005911

5707139 - 5727739

20601

ENSAPLT00000005910

5707139 - 5727739

20601

ENSAPLT00000020586

5707139 - 5727739

20601

ENSAPLT00000005912

5707139 - 5727739

20601