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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5715305_5716578_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5715305 - 5716578

Intron Length:

1274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCAGTGTC

5'SS Class:

major

3'SS Sequence:

TGTGTGTCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTGAG

U12 Branch Point Sequence:

AAGGAGTGAGCA

Flanking Amino Acid:

REQLREQMRREAEALETETK

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.3

72.2

Major BPS

42.8

-0.4

1.6

34.8

43.8

Major PPT

59.7

0.22

1.1

56.5

43.7

Minor 5ss

32.2

-2

3.2

36.2

40.7

Minor BPS

-1.1

2.2

40.86

39.1

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020586

5707139 - 5727739

20601

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005911

5707139 - 5727739

20601