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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5715305_5718980_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5715305 - 5718980

Intron Length:

3676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTGAG

U12 Branch Point Sequence:

AAGGAGTGAGCA

Flanking Amino Acid:

DASIQKERDKEAEALETETK

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

42.8

-0.4

1.6

34.8

43.8

Major PPT

59.7

0.22

1.1

56.5

43.7

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

-1.1

2.2

40.86

39.1

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005910

5707139 - 5727739

20601