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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5716708_5718980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5716708 - 5718980

Intron Length:

2273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCGATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCGAT

U12 Branch Point Sequence:

TCTCCCCCGATT

Flanking Amino Acid:

DASIQKERDKERAKLDAERK

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

47.5

-0.1

1.3

43.7

39.4

Major PPT

68.5

0.42

0.9

65.2

35.2

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

48.3

-0

1.9

69.85

41.2

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020586

5707139 - 5727739

20601

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005911

5707139 - 5727739

20601