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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5722484_5724164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5722484 - 5724164

Intron Length:

1681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

TGTCTGCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

CTGCTCTGAAAC

Flanking Amino Acid:

SPAAVYGLPAKPEALVNGGR

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

60.4

39.3

Major BPS

69.8

0.49

37.5

Major PPT

76.8

0.6

0.9

69.9

36.6

Minor 5ss

32.9

-2

3.4

38.9

Minor BPS

49.4

-0

1.6

57.61

40.8

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005910

5707139 - 5727739

20601

ENSAPLT00000020586

5707139 - 5727739

20601

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005911

5707139 - 5727739

20601