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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5724291_5726790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5724291 - 5726790

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

GGGAGCTGACAC

Flanking Amino Acid:

KIQRPTRLTQGCTICLGQAT

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

77.7

0.62

0.7

72.4

25.7

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

36.7

-1

1.9

38.99

38.9

Associated Gene:

Gene:

PHLDB1

Ensembl Gene ID:

ENSAPLG00000005721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020586

5707139 - 5727739

20601

ENSAPLT00000005912

5707139 - 5727739

20601

ENSAPLT00000005911

5707139 - 5727739

20601

ENSAPLT00000005910

5707139 - 5727739

20601