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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5732895_5733131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5732895 - 5733131

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTATCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CTCTACTGAATG

Flanking Amino Acid:

ISKKNYCNIQVTKVTQVDGN

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

69.5

37.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

75.7

0.58

0.9

69.1

Minor 5ss

35.9

-1.6

3.4

47.9

47.7

Minor BPS

51.5

-0

1.8

56.93

44.8

Associated Gene:

Gene:

ARCN1

Ensembl Gene ID:

ENSAPLG00000005425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005597

5732805 - 5738558

5754