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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5733337_5733469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5733337 - 5733469

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

CTGCCTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGGCAT

U12 Branch Point Sequence:

GGCATCGTAGCT

Flanking Amino Acid:

LNDVIITIPLPSGVGAPVIG

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

72.7

38.8

Major BPS

47.3

-0.1

1.4

55.1

42.1

Major PPT

67.5

0.4

0.9

61.7

34.9

Minor 5ss

37.9

-1.4

2.8

50.4

39.3

Minor BPS

-0.4

2.2

57.69

44.9

Associated Gene:

Gene:

ARCN1

Ensembl Gene ID:

ENSAPLG00000005425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005597

5732805 - 5738558

5754