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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5733579_5733925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5733579 - 5733925

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACAGCAT

U12 Branch Point Sequence:

TACAGCATACTG

Flanking Amino Acid:

TTEESFIPLTINCWPSESGN

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

46.8

-0.2

1.4

53.7

41.6

Major PPT

80.8

0.69

0.8

73.1

37.3

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

38.8

-0.9

2.1

41.77

43.1

Associated Gene:

Gene:

ARCN1

Ensembl Gene ID:

ENSAPLG00000005425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005597

5732805 - 5738558

5754