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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5734074_5735339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5734074 - 5735339

Intron Length:

1266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTTAT

U12 Branch Point Sequence:

CTTGGCTTATGT

Flanking Amino Acid:

NEDKRGVQLQTHPNVDKKLF

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

58.5

0.21

1.4

51.4

Major PPT

77.1

0.61

0.9

73.1

37.2

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

45.4

-0.2

2.3

66.83

49.8

Associated Gene:

Gene:

ARCN1

Ensembl Gene ID:

ENSAPLG00000005425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005597

5732805 - 5738558

5754