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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5738481_5738543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5738481 - 5738543

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCAGG

5'SS Class:

major

3'SS Sequence:

GTGTTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAA

U12 Branch Point Sequence:

GTGTTCTCCACA

Flanking Amino Acid:

MMLCQVLLAAAVCTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

57.4

46.9

Major BPS

51.9

0.05

1.2

44.7

38.6

Major PPT

75.1

0.57

0.9

37.2

Minor 5ss

41.2

-1

2.5

49.5

46.4

Minor BPS

49.3

-0

63.78

42.6

Associated Gene:

Gene:

ARCN1

Ensembl Gene ID:

ENSAPLG00000005425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005597

5732805 - 5738558

5754