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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5740217_5740295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5740217 - 5740295

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCGCG

5'SS Class:

major

3'SS Sequence:

TCCGGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAA

U12 Branch Point Sequence:

TCCGGCCCCACA

Flanking Amino Acid:

GSAGGGPDGEDAAAPPGLSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.7

42.9

Major BPS

47.8

-0.1

1.3

38.5

41.7

Major PPT

65.1

0.34

0.9

56.9

33.6

Minor 5ss

35.3

-1.7

3.5

47.1

48.5

Minor BPS

34.5

-1.2

2.3

43.3

44.9

Associated Gene:

Gene:

IFT46

Ensembl Gene ID:

ENSAPLG00000005573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005770

5740016 - 5743488

3473