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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5741840_5742420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5741840 - 5742420

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCAT

5'SS Class:

major

3'SS Sequence:

CCTTACCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTCCTTACCT

Flanking Amino Acid:

CKPPATVHYTRPMPDIETLM

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

65.3

42.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

79.9

0.67

0.8

73.1

31.4

Minor 5ss

34.6

-1.8

3.2

48.3

47.3

Minor BPS

85.2

1.18

1.4

100

28.8

Associated Gene:

Gene:

IFT46

Ensembl Gene ID:

ENSAPLG00000005573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005770

5740016 - 5743488

3473