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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5742488_5742605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5742488 - 5742605

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTTGAGAACA

Flanking Amino Acid:

SPEFEELLGKVGLPTAEMNC

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.8

30.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

81.8

0.71

0.8

73.3

35.8

Minor 5ss

44.3

-0.6

2.8

58.5

46.3

Minor BPS

48.3

-0.1

2.3

72.87

38.8

Associated Gene:

Gene:

IFT46

Ensembl Gene ID:

ENSAPLG00000005573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005770

5740016 - 5743488

3473