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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5748118_5748389_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5748118 - 5748389

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAGATGCA

5'SS Class:

strong_major

3'SS Sequence:

CGCCACAGAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CCTTTGTCACGC

Flanking Amino Acid:

EEEDVQEEGETFAPELLEQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

73.6

33.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

41.5

-0.4

1.6

36.1

33.6

Minor 5ss

20.6

-3.4

42.6

Minor BPS

36.4

-1

2.4

44.77

44.2

Associated Gene:

Gene:

TTC36

Ensembl Gene ID:

ENSAPLG00000005568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005748

5747589 - 5748503

915