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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5753821_5754251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5753821 - 5754251

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

ACTTGCCTAATT

Flanking Amino Acid:

DKREKYYDSKGIGCYMFRID

Intron Amino Acid Position:

3692

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

69.8

0.45

0.9

65.2

36.2

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

53.7

0.2

2.1

74.77

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701