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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5757730_5758453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5757730 - 5758453

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTAGTCTTAATT

Flanking Amino Acid:

PSQKQCGQSAGQMSVLAEPQ

Intron Amino Acid Position:

3422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.7

44.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.6

0.62

78.7

27.4

Minor 5ss

42.6

-0.8

2.9

49.5

46.5

Minor BPS

67.9

0.64

1.4

76.98

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701