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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5767720_5768109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5767720 - 5768109

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGAAAA

5'SS Class:

major

3'SS Sequence:

TTTTAACTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TCTCTTTTAACT

Flanking Amino Acid:

PLHPPTPPISSSDRSREDSP

Intron Amino Acid Position:

1644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

72.4

31.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

64.2

0.32

1.2

69.3

40.8

Minor 5ss

34.6

-1.7

42.1

39.6

Minor BPS

75.1

0.87

1.1

84.55

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701