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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5770263_5770889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5770263 - 5770889

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGATGTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTGATGTTAACA

Flanking Amino Acid:

TTSHLLRYRQAAKPPDLNPE

Intron Amino Acid Position:

1460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

67.2

0.39

1.1

61.4

43.4

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

49.9

-0

2.1

63.03

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701