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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5773623_5774794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5773623 - 5774794

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CTTGCTAAAACC

Flanking Amino Acid:

FLCASSGHVEFVYCQVCCEP

Intron Amino Acid Position:

1239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.65

0.7

72.5

25.6

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

47.5

-0.2

62.36

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701