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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5774909_5775766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5774909 - 5775766

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGGAC

5'SS Class:

major

3'SS Sequence:

TTTGTACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TCCTTTTGTACT

Flanking Amino Acid:

GVHRIRVDFKEDCEVENVWE

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.7

38.5

Major BPS

78.8

0.72

67.9

40.1

Major PPT

85.1

0.79

0.8

82.1

34.6

Minor 5ss

27.5

-2.6

3.8

39.6

46.7

Minor BPS

49.2

0.02

1.8

67.44

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701