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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5775896_5776715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5775896 - 5776715

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATACT

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTGACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

CTTTACTTGACT

Flanking Amino Acid:

FPVKQKPKEKEKPPPISKPE

Intron Amino Acid Position:

1158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

82.9

28.7

Major BPS

0.6

1.2

75.9

36.3

Major PPT

68.1

0.41

63.2

42.8

Minor 5ss

32.3

-2

2.8

43.2

43.8

Minor BPS

0.87

1.5

88.39

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701