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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5779896_5781150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5779896 - 5781150

Intron Length:

1255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGAAATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CTCTTCTGAAAT

Flanking Amino Acid:

LKQADQPKAQGQESDSSETS

Intron Amino Acid Position:

851

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

65.1

0.34

56.6

42.8

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

59.2

0.37

1.6

73.47

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701