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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5785262_5793157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5785262 - 5793157

Intron Length:

7896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTCCATCTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

84.9

0.78

0.8

80.1

31.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

50.5

0.09

2.2

79.95

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005072

5753545 - 5793245

39701