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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5803059_5803517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5803059 - 5803517

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

ATCTCCTCACTG

Flanking Amino Acid:

DRSTIARHLLSDQTDPFNRS

Intron Amino Acid Position:

1029

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.3

34.7

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

83.4

0.75

0.8

80.7

31.3

Minor 5ss

32.7

-2

3.1

42.9

44.3

Minor BPS

49.8

-0.1

1.9

57.67

44.4

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611