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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5803676_5804198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5803676 - 5804198

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGCTTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTGTTTTAAAA

Flanking Amino Acid:

AFSNLAERIKSLADRQQQEE

Intron Amino Acid Position:

977

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.8

0.36

1.1

47.3

Minor 5ss

26.7

-2.7

3.3

37.5

47.2

Minor BPS

60.5

0.32

1.5

68.55

37.9

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611