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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5805122_5805260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5805122 - 5805260

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

TTACTGTGAAGC

Flanking Amino Acid:

TIGTLAFLTSEIKSLFVHPF

Intron Amino Acid Position:

867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

81.7

0.71

0.9

73.1

42.1

Minor 5ss

30.2

-2.3

3.3

39.5

46.1

Minor BPS

43.1

-0.5

2.3

57.11

41.3

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611