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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5805436_5806322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5805436 - 5806322

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

TGTGTTGTTACA

Flanking Amino Acid:

AIFLLDEAIQYLSKIKVQQI

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

79.5

36.8

Major BPS

59.9

0.25

1.3

70.1

Major PPT

78.9

0.65

72.2

42.7

Minor 5ss

41.3

-1

3.7

63.6

48.1

Minor BPS

43.6

-0.5

2.3

58.61

41.4

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611