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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5806437_5806552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5806437 - 5806552

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

AGAGCATTAACT

Flanking Amino Acid:

GTDSYRQSIKALADYASENL

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

69.5

0.49

71.3

30.3

Major PPT

81.2

0.7

0.9

76.5

37.5

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

59.9

0.39

1.7

73.74

42.3

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611