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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5807808_5808408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5807808 - 5808408

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CCATGCTGAATT

Flanking Amino Acid:

FVTVFMGDVERMKNPHLRAK

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.9

33.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

34.9

-1.7

2.8

43.6

43.5

Minor BPS

49.7

0.06

1.9

65.17

45.6

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611