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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5808542_5808858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5808542 - 5808858

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAACTG

5'SS Class:

major

3'SS Sequence:

TCTCTGTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TCTCTGTTCACA

Flanking Amino Acid:

VENSALAYVPEFFADNLGDF

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

64.9

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

80.6

0.69

0.8

75.1

33.3

Minor 5ss

29.5

-2.4

3.2

38.3

46.6

Minor BPS

46.6

-0.2

2.4

63.68

43.1

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611