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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5809167_5810354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5809167 - 5810354

Intron Length:

1188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TCTTCCTCACCT

Flanking Amino Acid:

TQYTLHLGFHRLHDQMVKIN

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

78.8

35.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

35.2

-1.7

3.8

55.5

48.6

Minor BPS

65.5

0.56

1.9

84.08

42.8

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015517

5802920 - 5815530

12611

ENSAPLT00000031026

5802920 - 5815744

12825