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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5811084_5811861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5811084 - 5811861

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCTG

5'SS Class:

major

3'SS Sequence:

TTTCCTCTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTCCTCTAACA

Flanking Amino Acid:

IKVQESNIHQFMAQFHEKIY

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

60.4

45.8

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

81.3

0.7

0.8

77.5

29.8

Minor 5ss

27.5

-2.6

3.5

37.1

47.5

Minor BPS

68.9

0.59

1.6

81.78

32.8

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611