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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5812054_5812495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5812054 - 5812495

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTATAAAAAT

Flanking Amino Acid:

YFTKQKDIAKVFAGYIQPKD

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

70.1

0.45

0.9

62.3

39.2

Minor 5ss

36.2

-1.6

3.5

52.1

45.1

Minor BPS

47.2

-0.1

2.1

75.16

41.2

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611