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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5812699_5813093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5812699 - 5813093

Intron Length:

395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TATCCCTTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTGTCTGTAATG

Flanking Amino Acid:

DLMLEALRGAHFEDMTEFLE

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.3

81.8

38.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

68.3

0.41

62.3

39.4

Minor 5ss

40.7

-1

2.8

50.8

Minor BPS

57.1

0.09

2.1

66.43

42.4

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611