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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5813254_5813358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5813254 - 5813358

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CGTTTCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATCCAT

U12 Branch Point Sequence:

GATCCCAGATCC

Flanking Amino Acid:

YACFQRAREEITKVPENLLP

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.5

38.7

Major BPS

51.8

0.04

1.4

64.4

42.8

Major PPT

77.8

0.63

0.9

72.8

37.5

Minor 5ss

25.2

-2.8

3.2

31.3

42.9

Minor BPS

44.8

-0.4

1.9

56.63

40.6

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611