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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5813512_5814130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5813512 - 5814130

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGCGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

ACTGTTTCAACC

Flanking Amino Acid:

DWLDMENIEQALFTRLLLQE

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.6

42.2

Major BPS

0.57

1.2

77.7

37.1

Major PPT

66.2

0.37

58.1

43.2

Minor 5ss

39.3

-1.2

3.5

55.1

49.1

Minor BPS

0.01

1.6

59.84

Associated Gene:

Gene:

UBE4A

Ensembl Gene ID:

ENSAPLG00000014848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031026

5802920 - 5815744

12825

ENSAPLT00000015517

5802920 - 5815530

12611