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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5816227_5816525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5816227 - 5816525

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCACAT

U12 Branch Point Sequence:

TCCCCTGGGATG

Flanking Amino Acid:

IILEGIVEATGMTCQARTSY

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

47.9

-0.1

1.3

54.7

43.1

Major PPT

83.8

0.76

0.8

77.6

31.1

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

-1

39.53

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045704

5814553 - 5818439

3887

ENSAPLT00000019966

5814553 - 5818765

4213