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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5831295_5832287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5831295 - 5832287

Intron Length:

993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

GTGGGCTGGACA

Flanking Amino Acid:

LTGLELYQNRKYQESLTYLV

Intron Amino Acid Position:

964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

77.8

33.2

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

73.5

0.53

0.8

65.9

35.3

Minor 5ss

49.1

-0.1

2.8

64.7

Minor BPS

45.4

-0.3

55.52

43.6

Associated Gene:

Gene:

USP28

Ensembl Gene ID:

ENSAPLG00000015400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016123

5828996 - 5852602

23607