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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5832368_5832759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5832368 - 5832759

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCCTCCTCAACA

Flanking Amino Acid:

PDEVDMEEYKRWHEDYSLFR

Intron Amino Acid Position:

938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.5

32.8

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

73.9

0.54

0.8

69.4

29.9

Minor 5ss

29.5

-2.3

3.5

40.1

46.3

Minor BPS

70.8

0.65

1.6

75.44

42.2

Associated Gene:

Gene:

USP28

Ensembl Gene ID:

ENSAPLG00000015400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016123

5828996 - 5852602

23607