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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5836720_5837505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5836720 - 5837505

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGAG

5'SS Class:

major

3'SS Sequence:

GCATTTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATGTATTTCACT

Flanking Amino Acid:

ISDKVSSFVADEDDGSEVGQ

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

42.1

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

78.4

0.64

0.9

69.4

41.5

Minor 5ss

27.6

-2.6

3.6

37.4

47.3

Minor BPS

54.5

0.22

1.9

74.95

Associated Gene:

Gene:

USP28

Ensembl Gene ID:

ENSAPLG00000015400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016123

5828996 - 5852602

23607