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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5837735_5838055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5837735 - 5838055

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGAACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TCCATTTGAACT

Flanking Amino Acid:

QMYCDPLLQQVPYHLHAVLV

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

0.63

0.9

70.7

39.8

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

55.3

0.24

1.5

68.53

42.7

Associated Gene:

Gene:

USP28

Ensembl Gene ID:

ENSAPLG00000015400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016123

5828996 - 5852602

23607