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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5875907_5876041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5875907 - 5876041

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCACCTCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CCGTCCCCACCT

Flanking Amino Acid:

SLTFTSWLHNIRDINLSLWR

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

75.2

0.57

0.8

68.6

31.4

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

44.2

-0.3

2.1

60.38

48.8

Associated Gene:

Gene:

HTR3A

Ensembl Gene ID:

ENSAPLG00000002673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002712

5873567 - 5878682

5116